Jsure_head

Chromosome5 primers

by | Sep 18, 2018 | Primers | 0 comments

Seq ID Count Primer type Orientation Len tm GC% Any compl 3′ compl Seq Prod size Pair any compl Pair 3′ compl Motif Motif Len SSR SSRLen
CM001030.1 1 SSR FORWARD 21 55.88 42.86 6 3 TCTCCTTGAAAGGTCAATACC 297 3 1 AT 2 ATATATATATATAT 14
CM001030.1 1 SSR REVERSE 20 55.25 45 3 2 GTCATCATCCCCTGTTTATG
CM001030.1 1 SSR FORWARD 20 55.42 40 5 1 GGATCTTTGATCTTTGCTGA 269 6 2 TA 2 TATATATATATA 12
CM001030.1 1 SSR REVERSE 20 56.78 40 6 2 TCACCAAAAGGTGCATCTAA
CM001030.1 1 SSR FORWARD 20 55.28 45 4 0 AGGTTCTGTGACGATCTTTG 244 6 3 AT 2 ATATATATATATATATATATATATATATATATAT 34
CM001030.1 1 SSR REVERSE 20 55.4 40 4 2 ATGGTCACGTTCACAAATCT
CM001030.1 1 SSR FORWARD 20 55.86 40 3 1 GTAAAAAGGAAGGGGTTTGA 250 5 2 TC 2 TCTCTCTCTCTCTCTCTCTCTC 22
CM001030.1 1 SSR REVERSE 20 55.75 40 6 2 ATTGCTTCTGTTAACCCACA
CM001030.1 1 SSR FORWARD 20 55.11 50 5 2 CTAGTTCGTCAGGATCAAGC 250 5 1 CT 2 CTCTCTCTCTCTCTCT 16
CM001030.1 1 SSR REVERSE 20 55.74 50 2 0 GAACGAGGAAGAAGAGAAGG
CM001030.1 1 SSR FORWARD 20 55.08 40 7 1 TCATTCTGAGAAATGGGTTC 254 5 2 TC 2 TCTCTCTCTCTC 12
CM001030.1 1 SSR REVERSE 20 55.78 40 6 2 GGGGGAGAATTAAAACTCAA
CM001030.1 1 SSR FORWARD 20 55.24 40 2 0 GGTATGTCTTGCGTGATTTT 255 4 2 TC 2 TCTCTCTCTCTCTC 14
CM001030.1 1 SSR REVERSE 21 55.3 47.62 3 3 TTGAAGAGGAAGAGGAGAGTC
CM001030.1 1 SSR FORWARD 20 55.39 40 2 0 AAGGGGTGATTAGGAGAAAA 254 3 0 AG 2 AGAGAGAGAGAGAG 14
CM001030.1 1 SSR REVERSE 20 55.25 45 4 0 CAGATATAAGCGGAGCAAAC
CM001030.1 1 SSR FORWARD 20 55.72 45 3 1 AAGTCGGTAAAAGACCTGCT 250 3 0 TC 2 TCTCTCTCTCTCTCTCTC 18
CM001030.1 1 SSR REVERSE 20 55.47 40 6 2 TTCGAATCTCAAACCTATCG
CM001030.1 1 SSR FORWARD 21 55.72 42.86 6 2 TTGTACATACTAGCCCCATGA 237 5 1 TG 2 TGTGTGTGTGTG 12
CM001030.1 1 SSR REVERSE 20 55.22 45 4 0 AGTGCTACTTCGTCAATGCT
CM001030.1 1 SSR FORWARD 20 55.05 50 2 0 GAGAGCAGGAGATGAGTTTG 241 3 1 TA 2 TATATATATATATA 14
CM001030.1 1 SSR REVERSE 20 55.67 40 6 3 CCAGCAATTGATTTGGTAAC
CM001030.1 1 SSR FORWARD 20 55.05 40 4 3 TTGGTTATCTGTCCCAAAAC 252 4 0 AC 2 ACACACACACAC 12
CM001030.1 1 SSR REVERSE 20 55.91 40 4 1 TGCAATACGTCCAAAACTCT
CM001030.1 1 SSR FORWARD 20 55.33 45 4 2 TTGTTCTTCCTCTCATCGAC 247 5 2 AT 2 ATATATATATAT 12
CM001030.1 1 SSR REVERSE 20 55.97 40 4 1 TGCATGAATACACAAGGTCA
CM001030.1 1 SSR FORWARD 20 55.26 45 4 0 CCCCACTTATACGAAGAACA 254 4 0 AT 2 ATATATATATATATATAT 18
CM001030.1 1 SSR REVERSE 20 55.5 40 8 1 GCATATGCAAACCTAAGGAA
CM001030.1 1 SSR FORWARD 19 55.05 47.37 3 0 ACGACGAACCCTAAATCAC 257 3 1 TC 2 TCTCTCTCTCTCTCTCTC 18
CM001030.1 1 SSR REVERSE 20 55.07 45 4 3 AACCATATTGACTCCAGACG
CM001030.1 1 SSR FORWARD 20 55.02 40 3 1 TAACACACGACATTGAAGGA 261 3 0 TC 2 TCTCTCTCTCTC 12
CM001030.1 1 SSR REVERSE 20 55.17 40 4 2 CAAGAAAAGGAAAGTTGCAC
CM001030.1 1 SSR FORWARD 20 55.45 50 4 3 CTAATCTGCTTCGACTCTCG 235 6 2 AG 2 AGAGAGAGAGAG 12
CM001030.1 1 SSR REVERSE 20 55.43 45 7 0 CGATCAGATCAGAGAAGGAA
CM001030.1 1 SSR FORWARD 18 59.66 44.44 4 2 ATCATTTTGGGGCCATGA 293 4 2 AT 2 ATATATATATAT 12
CM001030.1 1 SSR REVERSE 20 58.29 50 4 2 GCAAGTCCCATGTTTCTCTG
CM001030.1 1 SSR FORWARD 20 55.86 55 3 0 GTTACCCCACTGACCCTATC 243 3 0 CT 2 CTCTCTCTCTCTCTCTCT 18
CM001030.1 1 SSR REVERSE 20 55.23 40 4 1 CCTCTCGATTTCATTATCCA
CM001030.1 1 SSR FORWARD 22 55.13 40.91 3 3 GCTAATCTCCTGTTTTTCTGAG 291 4 2 AG 2 AGAGAGAGAGAG 12
CM001030.1 1 SSR REVERSE 20 55.3 40 4 2 GAAGATGGCTTTATCCACAA
CM001030.1 1 SSR FORWARD 20 55.16 40 4 3 ACTGCTTCTTTTTCAGTGGA 270 5 0 TC 2 TCTCTCTCTCTC 12
CM001030.1 1 SSR REVERSE 20 55.51 45 2 0 CGGGAACATAGAGCATAAGA
CM001030.1 1 SSR FORWARD 20 55.14 45 4 0 GCAAAGGACTGTTGGTATGT 233 5 0 AT 2 ATATATATATATATATATATAT 22
CM001030.1 1 SSR REVERSE 20 55.39 40 6 2 TTGTCTTTTCCGGACTATTG
CM001030.1 1 SSR FORWARD 20 55.34 40 3 3 GGATTTCTGACGACTTTGAA 250 5 3 AT 2 ATATATATATATAT 14
CM001030.1 1 SSR REVERSE 20 55.3 40 4 2 GTCCTAGCAAATGAATCCAA
CM001030.1 1 SSR FORWARD 18 58.27 50 7 3 ATCCAACCGGGTTAAACG 294 5 3 AT 2 ATATATATATATATATATAT 20
CM001030.1 1 SSR REVERSE 20 56.98 45 6 2 AACCGGTGACATAGTTCGAT
CM001030.1 1 SSR FORWARD 20 55.6 40 3 0 TCATAATCCCTACACCGAAA 241 5 2 CT 2 CTCTCTCTCTCT 12
CM001030.1 1 SSR REVERSE 20 55.45 40 6 1 AAGGAATTCGAACAGGACTT
CM001030.1 1 SSR FORWARD 20 55.45 40 6 0 AAGTCCTGTTCGAATTCCTT 257 4 1 GA 2 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 40
CM001030.1 1 SSR REVERSE 21 55.73 47.62 8 0 GGAAGGTTAAGCCTTGTGTAG
CM001030.1 1 SSR FORWARD 20 55.13 40 6 0 TTCGAAAATGGAGAGAGAGA 255 5 0 AG 2 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 36
CM001030.1 1 SSR REVERSE 20 55.22 45 4 2 CTGACCTCCAACCTAATTGA
CM001030.1 1 SSR FORWARD 20 55.1 45 3 3 TTTACGGTCAGTGTGAGTGA 255 4 2 AC 2 ACACACACACAC 12
CM001030.1 1 SSR REVERSE 20 55.29 40 7 0 AACGCCGTTATACAACAATC
CM001030.1 1 SSR FORWARD 20 55.17 45 7 1 GTATAACGGCGTTGAGAAAG 244 3 0 GT 2 GTGTGTGTGTGTGTGTGTGT 20
CM001030.1 1 SSR REVERSE 20 55.03 45 3 0 GGTCCTTAGTGATGGTGAAA
CM001030.1 1 SSR FORWARD 20 55.33 45 6 2 GCAGATAGACCGGTGAATAA 233 5 2 AG 2 AGAGAGAGAGAGAGAG 16
CM001030.1 1 SSR REVERSE 20 55.2 50 2 2 CCCTCACCTACTTCTCATCA
CM001030.1 1 SSR FORWARD 20 55.26 40 4 0 GCATTAACCCCTAACAACAA 243 3 0 AT 2 ATATATATATATATAT 16
CM001030.1 1 SSR REVERSE 20 55.02 40 4 0 TGGACGTGAACAACAATAGA
CM001030.1 1 SSR FORWARD 20 55.54 50 5 0 TGTCACACTCTCTCCCATCT 256 2 0 TC 2 TCTCTCTCTCTC 12
CM001030.1 1 SSR REVERSE 20 56.55 50 4 0 GAATCTTCTCTCTCGCCATC
CM001030.1 1 SSR FORWARD 19 55.66 52.63 8 1 TGAAGAGCTCTCCGTTCTC 230 4 1 TC 2 TCTCTCTCTCTC 12
CM001030.1 1 SSR REVERSE 20 55.55 45 4 1 CCAATACGGGTTTGATACAG
CM001030.1 1 SSR FORWARD 20 55.94 45 4 1 CACATGGTGAGGAAAACACT 241 4 2 TA 2 TATATATATATATA 14
CM001030.1 1 SSR REVERSE 22 55.01 40.91 2 0 GAGAAAGAGTGAAGGAAACAAG
CM001030.1 1 SSR FORWARD 20 55.94 45 4 1 CACATGGTGAGGAAAACACT 280 4 3 TC 2 TCTCTCTCTCTCTC 14
CM001030.1 1 SSR REVERSE 21 55.29 47.62 4 0 GGTAGCTCTTTTGTGACCTCT
CM001030.1 1 SSR FORWARD 20 55.76 40 3 1 CTGAAAAGGCAACTCAAAGA 264 4 0 AG 2 AGAGAGAGAGAGAGAGAGAGAGAGAG 26
CM001030.1 1 SSR REVERSE 21 55.08 42.86 4 1 CAGTGAAGAACTTGAAACGAC
CM001030.1 1 SSR FORWARD 20 55.1 45 2 0 ATCTTGTGGTGTTCCTCTTG 251 5 1 AT 2 ATATATATATATATATATATATATATATATATAT 34
CM001030.1 1 SSR REVERSE 20 55.44 50 4 0 GTGACCACTTCAACCACTTC
CM001030.1 1 SSR FORWARD 20 55.5 40 3 1 GGGGTAGATTTTTGGAATGT 292 5 2 TA 2 TATATATATATA 12
CM001030.1 1 SSR REVERSE 22 55.21 40.91 6 3 CTTCTTAAGTGGCAAAAGACTC
CM001030.1 1 SSR FORWARD 20 55.03 40 5 2 CACTCAACCAATGATTTCCT 257 6 0 TA 2 TATATATATATATATATA 18
CM001030.1 1 SSR REVERSE 21 55.8 42.86 3 0 GGAGATTATTTTTCCCTACCC
CM001030.1 1 SSR FORWARD 20 55.05 40 2 1 GTATTTGGTGAGGGTTTTGA 276 3 1 AT 2 ATATATATATAT 12
CM001030.1 1 SSR REVERSE 21 56.01 42.86 6 0 CTATCCTATGATTTGGCGTCT
CM001030.1 1 SSR FORWARD 20 56.31 45 4 0 CACACAAGACATTCCAATCC 247 5 0 CT 2 CTCTCTCTCTCT 12
CM001030.1 1 SSR REVERSE 20 55.74 40 4 2 CCAACTGCAAAATGTTTACC
CM001030.1 1 SSR FORWARD 20 55.41 45 6 2 GAAGAGAGATCCATCTGCAA 265 4 1 CT 2 CTCTCTCTCTCTCTCT 16
CM001030.1 1 SSR REVERSE 20 55.1 45 3 3 CGTCACTCAAACACTCAATG
CM001030.1 1 SSR FORWARD 20 55.38 40 2 1 GCTGAAACCCAAGTATGAAA 264 2 0 AG 2 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 34
CM001030.1 1 SSR REVERSE 20 55.07 45 6 1 ACCTATCGATGACCAACAAG
CM001030.1 1 SSR FORWARD 20 55.64 45 4 2 ATCGTGCTTGACAGCTTTAC 256 4 1 AG 2 AGAGAGAGAGAGAG 14
CM001030.1 1 SSR REVERSE 20 55.41 45 5 3 CGAATCCTACAATGCAGACT
CM001030.1 1 SSR FORWARD 20 55.29 50 3 0 GAAGTTGGGTAGGAGGAAAC 241 7 3 AT 2 ATATATATATATATAT 16
CM001030.1 1 SSR REVERSE 20 55.03 45 4 0 TCCTCACAACCAATTACTCC
CM001030.1 1 SSR FORWARD 20 55.93 45 4 0 GTTCGTCCTGAATTGTGTGT 271 5 2 AC 2 ACACACACACAC 12
CM001030.1 1 SSR REVERSE 20 55.39 40 4 0 CGTAAGTCCTTCAAAATCCA
CM001030.1 1 SSR FORWARD 21 55.51 42.86 2 0 ACACCATCACCTACAAACAGA 250 4 2 GA 2 GAGAGAGAGAGAGA 14
CM001030.1 1 SSR REVERSE 20 55.11 55 6 0 GAAGCACGTGTCTCTCTCTC
CM001030.1 1 SSR FORWARD 20 55.94 45 7 2 GATGCAGGATGACATCAACT 217 6 1 TG 2 TGTGTGTGTGTGTG 14
CM001030.1 1 SSR REVERSE 20 55.17 45 2 2 GTGATGGTTTCCTATGGCTA
CM001030.1 1 SSR FORWARD 21 55.04 42.86 4 2 CCTTCGACCCTGTTTATATCT 263 3 0 AC 2 ACACACACACACAC 14
CM001030.1 1 SSR REVERSE 20 55.31 45 4 1 GCCAGTTACGTTGTGATTCT
CM001030.1 1 SSR FORWARD 20 55.2 40 4 0 CAGTCATCATCCACATGAAA 269 4 2 TA 2 TATATATATATATATATATATATA 24
CM001030.1 1 SSR REVERSE 20 55.16 40 4 1 GCGATGTCAATAGAATGGTT
CM001030.1 1 SSR FORWARD 19 56.53 42.11 2 0 CAAAATGAAACGGATGGAG 281 3 2 TC 2 TCTCTCTCTCTCTCTC 16
CM001030.1 1 SSR REVERSE 20 55.4 45 3 2 GCCAAGACAATGAGCACTAT
CM001030.1 1 SSR FORWARD 19 56.53 42.11 2 0 CAAAATGAAACGGATGGAG 281 3 2 TC 2 TCTCTCTCTCTCTCTC 16
CM001030.1 1 SSR REVERSE 20 55.4 45 3 2 GCCAAGACAATGAGCACTAT
CM001030.1 1 SSR FORWARD 20 55.5 45 4 1 TGATGAGTACGGTGGATTCT 243 4 3 TA 2 TATATATATATA 12
CM001030.1 1 SSR REVERSE 20 55.11 45 4 2 GTCATAACCCGCAACACTAT

Submit a Comment

Your email address will not be published. Required fields are marked *

Designed & Maintained By Rajdhandev Websoft Pvt. Ltd.
societ-copy-300x300
Facebook Twitter Youtube