Jsure_head

Chromosome11 primers

by | Sep 18, 2018 | Primers | 0 comments

Seq ID Count Primer type Orientation Len tm GC% Any compl 3′ compl Seq Prod size Pair any compl Pair 3′ compl Motif Motif Len SSR SSRLen
CM001036.1 1 SSR FORWARD 20 55.11 50 4 0 GAGCGACTGATCCAAGTAAG 248 4 0 CT 2 CTCTCTCTCTCTCTCTCTCTCTCTCTCT 28
CM001036.1 1 SSR REVERSE 20 55.01 50 2 2 GAGATGGTCAAGAGGGTGTA
CM001036.1 1 SSR FORWARD 20 55.09 45 4 2 GTGGTGAACAAACTCTCGAT 253 5 1 AT 2 ATATATATATATATATAT 18
CM001036.1 1 SSR REVERSE 20 55.28 45 4 0 TAGACTTGAGCACACCAACA
CM001036.1 1 SSR FORWARD 20 55.37 45 3 0 TCCTGAGCCTGAAAACATAC 254 5 2 TA 2 TATATATATATATA 14
CM001036.1 1 SSR REVERSE 20 55.03 40 4 0 CATGAGGGTGATTTTCTTGT
CM001036.1 1 SSR FORWARD 20 55.03 40 6 2 CCATTTGTGAGAATTCACCT 256 5 0 TG 2 TGTGTGTGTGTG 12
CM001036.1 1 SSR REVERSE 20 55.92 50 0 0 ACACACCACAACACACACAC
CM001036.1 1 SSR FORWARD 20 55.03 40 6 2 CCATTTGTGAGAATTCACCT 256 5 0 TG 2 TGTGTGTGTGTGTGTGTGTG 20
CM001036.1 1 SSR REVERSE 20 55.92 50 0 0 ACACACCACAACACACACAC
CM001036.1 1 SSR FORWARD 20 55.03 40 6 2 CCATTTGTGAGAATTCACCT 256 5 0 TG 2 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 30
CM001036.1 1 SSR REVERSE 20 55.92 50 0 0 ACACACCACAACACACACAC
CM001036.1 1 SSR FORWARD 20 55.03 40 6 2 CCATTTGTGAGAATTCACCT 256 5 0 TG 2 TGTGTGTGTGTGTGTGTGTG 20
CM001036.1 1 SSR REVERSE 20 55.92 50 0 0 ACACACCACAACACACACAC
CM001036.1 1 SSR FORWARD 20 55.03 40 6 2 CCATTTGTGAGAATTCACCT 256 5 0 TG 2 TGTGTGTGTGTG 12
CM001036.1 1 SSR REVERSE 20 55.92 50 0 0 ACACACCACAACACACACAC
CM001036.1 1 SSR FORWARD 20 55.68 45 2 0 TGCTGTTTGGTGTGTGTAAG 218 7 3 GT 2 GTGTGTGTGTGTGT 14
CM001036.1 1 SSR REVERSE 19 55.07 52.63 3 0 ACACACCGTCACACAACTC
CM001036.1 1 SSR FORWARD 20 55.46 40 4 3 TGAAAGACCATTCCATGAGT 233 4 1 AT 2 ATATATATATAT 12
CM001036.1 1 SSR REVERSE 20 55.05 40 5 0 GTGGGGTCAATGAACTAAAA
CM001036.1 1 SSR FORWARD 21 55.64 47.62 7 1 CTGTGACCACTGATCAAACTC 250 4 2 AT 2 ATATATATATATAT 14
CM001036.1 1 SSR REVERSE 22 55.55 40.91 4 1 GTTCGGCTAATTGAGTAAGAGA
CM001036.1 1 SSR FORWARD 20 56.35 45 4 2 TGTTGTGAGGAGATTTCGAG 251 6 3 AG 2 AGAGAGAGAGAGAG 14
CM001036.1 1 SSR REVERSE 20 55.21 55 2 0 GCTCTCTCTCTCTCCCATCT
CM001036.1 1 SSR FORWARD 20 55.61 45 5 2 AAGGAGACCTTCTCATGCTT 259 6 0 GA 2 GAGAGAGAGAGA 12
CM001036.1 1 SSR REVERSE 19 55.29 47.37 6 2 CACATGTCTCCATGCAACT
CM001036.1 1 SSR FORWARD 22 55.7 45.45 8 2 GCAAGTAACACGTGTACGACTA 258 5 3 AT 2 ATATATATATATAT 14
CM001036.1 1 SSR REVERSE 20 55.17 40 5 2 TAGTCCAAATTCGCTACGTT
CM001036.1 1 SSR FORWARD 20 55.82 40 4 0 TTAAGGGGACAAAATTAGGG 249 4 2 GA 2 GAGAGAGAGAGAGAGA 16
CM001036.1 1 SSR REVERSE 21 55.02 42.86 2 0 ATTTCACACAGACAACACTCC
CM001036.1 1 SSR FORWARD 20 56.17 40 4 2 GGTTCAAACAACCTTGCATA 277 4 0 CT 2 CTCTCTCTCTCTCT 14
CM001036.1 1 SSR REVERSE 18 55.28 44.44 4 2 TAAACCCCCAAAAAGCTC
CM001036.1 1 SSR FORWARD 20 55.36 45 5 3 ACCTTCTTGGTTCTCAACCT 250 6 2 AG 2 AGAGAGAGAGAG 12
CM001036.1 1 SSR REVERSE 20 55.59 45 5 0 TCTCACCGAGAAAGACAAAG
CM001036.1 1 SSR FORWARD 19 55.26 47.37 4 2 ATCTCAACGGATCTCGAAG 253 3 1 AG 2 AGAGAGAGAGAG 12
CM001036.1 1 SSR REVERSE 20 55.03 45 3 1 GACCCAATCTAAACCAGTGA
CM001036.1 1 SSR FORWARD 20 55.12 40 2 0 AAACAATAGCCAACGAGAGA 251 6 0 AG 2 AGAGAGAGAGAG 12
CM001036.1 1 SSR REVERSE 20 55.08 55 3 0 TCTCTCCCCAGACACTACAC
CM001036.1 1 SSR FORWARD 21 55.13 42.86 2 0 CGTAGAAAAAGGAGGAGAAAG 246 3 1 TA 2 TATATATATATATATATATATATATATATATATA 34
CM001036.1 1 SSR REVERSE 19 55.06 47.37 4 2 AGACGCGGATCTTAACCTA
CM001036.1 1 SSR FORWARD 20 55.1 45 4 2 CATGTCAAGAACCTGAACCT 253 4 2 TG 2 TGTGTGTGTGTG 12
CM001036.1 1 SSR REVERSE 20 55.07 45 4 2 ATGAGTTCCAACAGATACCG
CM001036.1 1 SSR FORWARD 20 55.96 40 4 2 AATTACATCACATGGGCTTG 256 4 1 TA 2 TATATATATATATATA 16
CM001036.1 1 SSR REVERSE 20 55.22 40 6 1 TTACAATCCGGAAACTTGAC
CM001036.1 1 SSR FORWARD 20 55.12 40 3 1 AGCATCGTCTAAAAAGGTGA 248 3 1 TA 2 TATATATATATA 12
CM001036.1 1 SSR REVERSE 20 55.34 40 6 1 CCACGTGTGTGAATGAATAA
CM001036.1 1 SSR FORWARD 20 55.41 45 4 1 GTCTCTGGAAGAAAACGTGA 245 4 2 TA 2 TATATATATATATATA 16
CM001036.1 1 SSR REVERSE 20 55.55 40 4 1 CAAAATTGCTACCCTCTCAA
CM001036.1 1 SSR FORWARD 20 55.41 45 4 1 GTCTCTGGAAGAAAACGTGA 245 4 2 TA 2 TATATATATATA 12
CM001036.1 1 SSR REVERSE 20 55.55 40 4 1 CAAAATTGCTACCCTCTCAA
CM001036.1 1 SSR FORWARD 20 55.18 45 7 3 GGACTCACTGAATCAGCAAT 252 3 2 TA 2 TATATATATATATA 14
CM001036.1 1 SSR REVERSE 19 55.39 42.11 4 2 ATTTATCTGCGAAGGATGC
CM001036.1 1 SSR FORWARD 20 55.16 40 7 0 TGTGTCTGAAGGCTTCTTTT 277 4 0 GA 2 GAGAGAGAGAGAGA 14
CM001036.1 1 SSR REVERSE 20 55.05 45 6 1 ATGGGTACCTTTGGGTAAGT
CM001036.1 1 SSR FORWARD 20 55.26 40 4 0 GGCCACAAGGTAATAAACAA 224 3 2 AT 2 ATATATATATAT 12
CM001036.1 1 SSR REVERSE 20 55.29 40 4 2 AAAGCTAACTCAGGCATTGA
CM001036.1 1 SSR FORWARD 20 56.56 40 5 3 GGACATTGGTTTAGCCATTT 280 4 1 CT 2 CTCTCTCTCTCTCTCTCTCTCT 22
CM001036.1 1 SSR REVERSE 18 55.91 55.56 6 0 GATGGGATCCGAGAGAGA
CM001036.1 1 SSR FORWARD 20 55.41 45 6 0 TCTGTCTGAACCGAAAGAAC 240 3 0 CT 2 CTCTCTCTCTCTCT 14
CM001036.1 1 SSR REVERSE 20 55.29 40 5 1 TCGTCGAAACACAACACTAA
CM001036.1 1 SSR FORWARD 20 55.19 45 4 2 AGCTAAGAACAGGTCGAACA 238 3 0 TC 2 TCTCTCTCTCTCTC 14
CM001036.1 1 SSR REVERSE 20 55.14 50 2 0 AGAGAAGAGGGACGAAGAAC
CM001036.1 1 SSR FORWARD 20 55.14 45 3 0 TTGTCGTCGTCTTCTCTCTT 267 3 2 TC 2 TCTCTCTCTCTCTCTCTCTCTC 22
CM001036.1 1 SSR REVERSE 20 55.58 45 3 2 CTTTACATTTCCCCCTAAGC
CM001036.1 1 SSR FORWARD 21 55.28 42.86 8 3 ACACACTCGAGTTCAAAACAC 263 6 3 AT 2 ATATATATATATATATATATATAT 24
CM001036.1 1 SSR REVERSE 22 55.13 40.91 4 0 AGTTGTACTTAGGGTTTGTTGG
CM001036.1 1 SSR FORWARD 20 56.08 40 4 3 CAGAGGATGGTCATTTTCAA 261 4 0 GA 2 GAGAGAGAGAGAGAGAGAGAGA 22
CM001036.1 1 SSR REVERSE 21 55.43 42.86 3 2 TCTCAATCTCTTCCCTAAAGC
CM001036.1 1 SSR FORWARD 20 55.53 45 4 2 ACCGCATACTAAAGTCAACG 253 3 1 GA 2 GAGAGAGAGAGAGA 14
CM001036.1 1 SSR REVERSE 20 55.01 45 4 0 CAGAGTTCATCAGGATTGGT
CM001036.1 1 SSR FORWARD 20 55.09 50 4 0 GACTAAGCTCCAGCATCAAC 247 3 0 AT 2 ATATATATATATAT 14
CM001036.1 1 SSR REVERSE 20 56.07 45 4 2 CGACTATCGAAAACAACTGC
CM001036.1 1 SSR FORWARD 20 55.31 50 4 0 AACCTCTTCAGCTCTTCCTC 248 5 2 CT 2 CTCTCTCTCTCTCTCT 16
CM001036.1 1 SSR REVERSE 20 55.95 45 4 2 GCTTTTCCAGAGAGATGGAT
CM001036.1 1 SSR FORWARD 20 55.28 45 7 2 AGGGAAGTTCCAACTCTGAT 259 4 2 CT 2 CTCTCTCTCTCTCTCTCTCT 20
CM001036.1 1 SSR REVERSE 20 55.53 40 6 3 GAAGCAATCTGCTGAACAAT
CM001036.1 1 SSR FORWARD 20 55.74 45 2 0 CCTTCTTCTCTTTCGTTTCC 257 4 0 AG 2 AGAGAGAGAGAG 12
CM001036.1 1 SSR REVERSE 20 55.01 40 7 1 ATCCTGAGGAATTGGGTATT
CM001036.1 1 SSR FORWARD 20 55.96 45 4 0 TCCACACTGCCATATTAACC 283 2 0 AT 2 ATATATATATATATATAT 18
CM001036.1 1 SSR REVERSE 20 55.23 40 3 2 ATCGTCATTCCTCATCACAT
CM001036.1 1 SSR FORWARD 20 55.97 45 4 0 CTGTTGAAGCTGAACCAAAC 250 3 0 GA 2 GAGAGAGAGAGAGA 14
CM001036.1 1 SSR REVERSE 20 56.05 40 4 0 TGAAACTAGAAGGCACCAAA
CM001036.1 1 SSR FORWARD 20 55.01 40 4 2 ATCTTGGAATACCCTTGGAT 252 4 3 TC 2 TCTCTCTCTCTCTCTCTC 18
CM001036.1 1 SSR REVERSE 20 55.89 45 3 2 AGCCAGGAAACACCTTTATC
CM001036.1 1 SSR FORWARD 22 55.03 40.91 6 0 GGGCTTAGAATTACAAAGAGTG 269 3 1 GT 2 GTGTGTGTGTGT 12
CM001036.1 1 SSR REVERSE 20 55.45 40 4 2 AAAACCGGAGAGAGATGTTT
CM001036.1 1 SSR FORWARD 20 55.39 45 5 2 ATGTCATTGTCGTCAGGTCT 266 4 0 TC 2 TCTCTCTCTCTC 12
CM001036.1 1 SSR REVERSE 20 55.39 50 6 3 AGTCGAGGTGTACAAGTTGC
CM001036.1 1 SSR FORWARD 20 55.38 50 3 2 TACCTCTGATTGTCCTCTCG 228 4 3 AT 2 ATATATATATATAT 14
CM001036.1 1 SSR REVERSE 20 55.59 40 4 2 TTAAACGAAGGCAGTATTGG
CM001036.1 1 SSR FORWARD 20 55.31 40 2 1 ATCGTGTGGAATGAATGAGT 278 3 2 AG 2 AGAGAGAGAGAGAGAG 16
CM001036.1 1 SSR REVERSE 20 55.76 45 4 3 ACAGGGGGCAAAAGTTATAC
CM001036.1 1 SSR FORWARD 20 55.38 45 6 2 TAATGGGCCACATAGTAAGC 249 4 2 CT 2 CTCTCTCTCTCTCT 14
CM001036.1 1 SSR REVERSE 20 55.3 40 2 2 TGGATTTCTACAGGATTTGC
CM001036.1 1 SSR FORWARD 20 55.24 40 6 3 TCAGAGACACAACGTTTGAA 247 4 1 AT 2 ATATATATATATAT 14
CM001036.1 1 SSR REVERSE 20 55.17 40 4 0 ATATTGCAGGATTCACTTGG
CM001036.1 1 SSR FORWARD 20 55.03 45 3 0 TATGGGAGAACACAACCTTC 252 5 1 AG 2 AGAGAGAGAGAG 12
CM001036.1 1 SSR REVERSE 20 55.25 45 4 1 TTGCATAACCCCTGTAGTTC
CM001036.1 1 SSR FORWARD 20 55.11 50 3 2 TATTAGCCAGCAGAGAGAGC 270 3 2 GT 2 GTGTGTGTGTGTGT 14
CM001036.1 1 SSR REVERSE 20 55.32 45 3 3 AGGGCAAGAAAGAAAGACTC
CM001036.1 1 SSR FORWARD 21 55.79 42.86 6 3 GCCGTTGTTATTACATCACTG 272 4 3 AT 2 ATATATATATAT 12
CM001036.1 1 SSR REVERSE 20 55.15 45 4 2 CATGTGCAATCTACGATCAG
CM001036.1 1 SSR FORWARD 20 55.63 40 3 0 CTAACTTCCAAACCAAGCAA 257 3 0 AT 2 ATATATATATAT 12
CM001036.1 1 SSR REVERSE 19 55.25 47.37 4 0 AAGCTCAACCTCCAACAAC
CM001036.1 1 SSR FORWARD 20 55.87 45 4 2 TGGCTATACAAGTTCCCGTA 252 3 1 GA 2 GAGAGAGAGAGAGA 14
CM001036.1 1 SSR REVERSE 20 55.88 45 5 2 ATGACAGTAATGGTGGTTGC

Submit a Comment

Your email address will not be published. Required fields are marked *

Designed & Maintained By Rajdhandev Websoft Pvt. Ltd.
societ-copy-300x300
Facebook Twitter Youtube